A bacteriophage infects a host cell and the genome integrates itself into the host chromosome. Sometime later, the phage is excised along with a short piece of DNA adjacent to the insertion point. Both the phage DNA and the host DNA are packaged into the same capsid. The bacteriophage then infects a new cell, delivering both phage and bacterial DNA.
Which process is being described in this scenario above?
Take your time on this one. I recommend writing out the table by hand in front of you & filling it out before submitting your final answer.
Once you have the completed, accurate table, please use it to study for Midterm 2!
Enzyme | Host or viral? | Template molecule (what does the enzyme "read?") | Product of the reaction (What does the enzyme "make?") | Typical location of reaction? |
DNA polymerase | host | DNA | DNA | nucleus |
RNA polymerase (DNA-dependent) | host | DNA | RNA | nucleus |
RNA-dependent RNA polymerase | viral | + ssRNA or -ssRNA | RNA | cytoplasm |
Reverse Transcriptase | viral | + ssRNA or -ssRNA | DNA | cytoplasm |
Ribosome | host | + ssRNA | protein | cytoplasm |
(-)ssRNA can be directly used in translation at the ribosome.
True or False
❌ False
Explanation:
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(-)ssRNA (negative-sense single-stranded RNA) cannot be directly used for translation by ribosomes.
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It must first be converted into complementary (+)ssRNA (positive-sense RNA), which can be used as mRNA for translation.
Viruses with (-)ssRNA genomes must carry their own RNA-dependent RNA polymerase to make the +ssRNA needed for protein synthesis.
Which of the following is a novel enzyme found in retroviruses?
Group of answer choices
- DNA polymerase
- retrotranscriptase
- reverse transcriptase
- integrase
The correct answer is: ✅ reverse transcriptase
Explanation:
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Reverse transcriptase is a novel enzyme found in retroviruses.
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It converts RNA → DNA, which is the reverse of normal transcription (DNA → RNA).
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This allows the viral RNA genome to be converted into DNA and integrated into the host genome.
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Why not the others?
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DNA polymerase: Common in many organisms, not unique to retroviruses.
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Retrotranscriptase: Not an actual enzyme name — this is a misleading term; the correct name is reverse transcriptase.
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Integrase: Retroviruses do use integrase to insert viral DNA into the host genome, but it's not unique to retroviruses and not as central as reverse transcriptase.
A bacteriophage infects a host cell and the genome integrates itself into the host chromosome. Sometime later, the phage is excised along with a short piece of DNA adjacent to the insertion point. Both the phage DNA and the host DNA are packaged into the same capsid. The bacteriophage then infects a new cell, delivering both phage and bacterial DNA.
Which process is being described in this scenario above?
- Group of answer choices
- The lysogenic cycle, reactivating as the lytic cycle, followed by transduction
- The lytic cycle, reactivating as the lysogenic cycle, followed by transduction
✅ The lysogenic cycle, reactivating as the lytic cycle, followed by transduction
Explanation:
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Lysogenic cycle:
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The phage genome integrates into the host chromosome (called a prophage).
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Reactivation:
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Later, the prophage is excised from the host DNA. In rare cases, it accidentally takes some nearby host DNA with it.
-
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Lytic cycle:
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The phage enters the lytic cycle, making new viruses and packaging the combined phage + host DNA into capsids.
-
-
Transduction:
-
When a new cell is infected, it receives both phage DNA and host DNA — a process known as specialized transduction.
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The correct answers are:
✅ B. It is an obligate intracellular pathogen
✅ C. Its genome consists of DNA or RNA
✅ D. Its genome is surrounded by a protein capsid
Explanation:
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❌ A. It is an infectious cellular pathogen → Incorrect
Viruses are not cellular. They are acellular (not made of cells) and therefore not considered cellular pathogens. -
✅ B. It is an obligate intracellular pathogen → Correct
Viruses must infect a host cell to replicate; they cannot reproduce on their own. -
✅ C. Its genome consists of DNA or RNA → Correct
A virus has either DNA or RNA, but never both. -
✅ D. Its genome is surrounded by a protein capsid → Correct
The capsid is the protein shell that protects the viral genome.
Viral RNA polymerases lack the proofreading ability that DNA polymerases have. This means:
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RNA viruses make more copying errors during replication.
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These errors lead to a higher mutation rate in RNA viruses compared to DNA viruses.
This is one reason why RNA viruses (like influenza and HIV) evolve so quickly.
- Which of the following are ways we can categorize the types of viruses by their genetic content?
The correct answers are:
✅ Linear or circular nucleic acids
✅ RNA or DNA
✅ Single Stranded or Double StrandedExplanation:
These three options refer specifically to the genetic content of viruses:
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RNA or DNA: Viruses can have either RNA or DNA genomes (but never both).
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Single Stranded or Double Stranded: Viral genomes can be either single-stranded (ss) or double-stranded (ds), whether it's RNA or DNA.
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Linear or Circular Nucleic Acids: Some viral genomes are linear (like most viruses), while others are circular.
❌ Incorrect:
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Icosohedral or Complex: This refers to the shape/structure (capsid symmetry) of the virus, not the genetic content.
✔️ So, the first three options are correct ways to categorize viruses by genetic content.
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The envelope of a virus is derived from the host’s...
Group of answer choices
- nucleic acids
- membrane structures
- cytoplasm
- genome
What is the name for the transfer of genetic information from one bacterium to another bacterium by a phage? (hint we covered this in lecture 9; also phage = bacterial virus)
Group of answer choices
- transduction
- penetration
- excision
- translation
The correct answer is: ✅ transduction
Explanation:
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Transduction is the process by which a bacteriophage (phage) transfers genetic material from one bacterium to another.
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It’s a form of horizontal gene transfer in bacteria.
Other options:
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Penetration: Step where a virus injects its genetic material into a host cell.
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Excision: Removal of viral DNA from the host genome (like in the lysogenic cycle).
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Translation: Process of making proteins from mRNA, not related to gene transfer by phages.
The correct answers are:
✅ metabolic processes
✅ ribosomes
Explanation:
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Viruses lack metabolic processes: They cannot carry out metabolism on their own and must rely on a host cell for energy and resources.
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Viruses lack ribosomes: They cannot synthesize proteins independently and must use the host cell’s ribosomes to translate viral proteins.
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Glycoprotein: Many viruses have glycoproteins on their surface (e.g., spike proteins on coronaviruses), so they do not lack these.
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Nucleic acid: All viruses contain either DNA or RNA, so they do not lack nucleic acid.
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